July 5, 20248 min read

Why Exercise Makes Long Covid and CFS Symptoms worse and how to Fix it

A truth that most know, yet something that everyone still attempts. Over and over. Trapped in an endless cycle like Sisyphus and the Boulder or Prometheus and the Eagle. Be honest, how many times have you exercised only to make your symptoms flare up and worsen your baseline? This exercise amount is different for everyone. For the most severe cases, this might mean doing a few extra chores around the house. For others, this means pushing an extra workout set above your previous limit.

The PEM crash curve: how exercise worsens ME/CFS and Long Covid A curve showing energy level over time. A healthy person recovers within hours after exertion. A person with ME/CFS or Long Covid crashes 12 to 48 hours after activity, dropping below their baseline and taking days or weeks to recover. This delayed collapse is post-exertional malaise. POST-EXERTIONAL MALAISE Why you feel worse 1-2 days after exertion Energy level baseline Activity Hours 1-6 12-48 hrs later Days / weeks Recovery Healthy Felt OK PEM crash Below baseline for days or weeks The trap You feel okay during activity. The bill comes 12-48 hrs later. Mitochondria fail under load, forcing anaerobic backup. The cleanup debt triggers the delayed crash.

To exercise or not to exercise, that is the question. On one hand, if you don't do anything, your tolerance will keep decreasing. If you do too much your tolerance will keep decreasing. This is why pacing is so important and a cornerstone of ME/CFS for the last few decades. If you don't take pacing seriously, you're going to keep landing in the mud. Yes, that means you should keep a journal and track daily energy expenditure. That's why you should have a steps counter and find the sweet spot which you can try to increase week over week.

Exercise, especially intense exercise, can lower Immunoglobulin levels, which are crucial for maintaining immune defenses against latent infections like long COVID (LC) and herpes. Reduced IgG levels can create a window of vulnerability, allowing these viruses to become more active and cause significant damage, which can scale with increased physical activity. Understanding the duration of lowered IgG levels post-exercise and the impact of an active herpes flare-up on these levels is critical for managing this risk.

Fasting plays a significant role in cleaning up metabolic and viral debris, which helps push back potential viral reactivation and reset the immune system. By promoting autophagy, fasting aids in the removal of damaged cells and viral particles, providing a reset that can stabilize the system. Supplementing during the vulnerability window between exercise-induced IgG suppression and immune recovery is crucial.

In theory, combining exercise with adequate levels of antiviral supplements like monolaurin, nicotine, and L-lysine might allow one to exercise while mitigating the risks associated with lowered IgG levels. Long-term fasting, such as a 9-day dry fast, can provide significant healing benefits by eating through most debris and reversing downstream damage caused by viral flare-ups. (Getting into hard-to-reach places via osmotic pressure like the lungs or extremities). However, while a 15-20 day dry fast might theoretically eliminate latent viruses, this remains uncertain and requires more evidence. The focus should remain on maintaining a balance through manageable fasting periods, nutritional support, and careful monitoring of immune function/pacing.

Improving Lactate Clearance and Oxygenation

Broken aerobic system: anaerobic threshold is too low in ME/CFS and Long Covid Two columns compare a healthy person and someone with ME/CFS or Long Covid. In a healthy person the aerobic zone is wide and lactate stays low. In the sick person the aerobic zone is tiny, they hit anaerobic metabolism almost immediately, lactate floods the muscles, and oxygenation drops. Improving lactate clearance and oxygenation is the first fix. THE BROKEN ENERGY FLOOR Aerobic capacity is crushed: anaerobic kicks in too early HEALTHY AEROBIC ZONE ANAEROBIC AT threshold (high) Lactate stays low Oxygen delivery is efficient Mitochondria run clean CO2 cleared, no burnout Wide exercise window Hours before threshold hit ME/CFS + LONG COVID AEROBIC (tiny) ANAEROBIC ZONE AT threshold (crushed) Lactate floods immediately Even light activity hits the wall Mitochondria dysfunctional PDH gate blocked, ATP collapses Minuscule exercise window Chores = exertion. PEM follows. Fix: rebuild the aerobic floor first (T3, B1, breathwork, lactate clearance) Pushing harder before fixing the engine just deepens the hole

Improving lactate clearance and oxygenation is fundamental for managing ME/CFS symptoms. This involves strategies that enhance the body's ability to deliver oxygen to tissues, thus reducing the production of lactate, a byproduct of anaerobic metabolism. Practicing diaphragmatic breathing or Buteyko breathing techniques can significantly increase CO2 tolerance and improve overall oxygenation. Gentle, graded exercise tailored to individual capacity helps improve aerobic metabolism, aiding in the efficient clearance of lactate. This is obviously not the end-all-be-all of LC and CFS, but it is another reason to fast when exercising or flaring.

  • Look into the mammalian diving response. Build your CO2 tolerance with a daily routine of breathwork
  • Remember how drastically dry fasting improves oxygenation of the blood?
  • Fasting creates an energy deficit that forces the body to scavenge and clear lactate faster. Faster Faster!

Improve Oxidative Stress

A 5-day dry fast is magical when done right.

Enhanced Antioxidant Defense: The increase in TAC and uric acid suggests that dry fasting might boost the body's overall antioxidant capacity, helping to reduce oxidative stress. Something to consider is boosting vitamin C levels before the fast - as strategized in my earlier scorch protocols. Gout is another concern, but knowing that gout sufferers have been known to dry fast to deal with acute gout flares shows us that there are deeper mechanisms at play even when it comes to gout and how little we truly know about it. Gout's underlying problem is a metabolic dysregulation. Dry fasting helps heal it.

Autophagy: Dry fasting promotes autophagy, a process where the body cleans out damaged cells and regenerates new ones, which can further reduce oxidative stress.

Oxidative Stress is a shared characteristic of ME/CFS and Long COVID
More than 65 million individuals worldwide are estimated to have Long COVID (LC), a complex multisystemic condition, wherein patients of all ages report fatigue, post-exertional malaise, and other symptoms resembling myalgic encephalomyelitis / chronic fatigue syndrome (ME/CFS). With no current treatments or reliable diagnostic markers, there is an urgent need to define the molecular underpinnings of these conditions. By studying bioenergetic characteristics of peripheral blood lymphocytes in over 16 healthy controls, 15 ME/CFS, and 15 LC, we find both ME/CFS and LC donors exhibit signs of elevated oxidative stress, relative to healthy controls, especially in the memory subset. Using a combination of flow cytometry, bulk RNA-seq analysis, mass spectrometry, and systems chemistry analysis, we also observed aberrations in ROS clearance pathways including elevated glutathione levels, decreases in mitochondrial superoxide dismutase levels, and glutathione peroxidase 4 mediated lipid oxidative damage. Critically, these changes in redox pathways show striking sex-specific trends. While females diagnosed with ME/CFS exhibit higher total ROS and mitochondrial calcium levels, males with an ME/CFS diagnosis have normal ROS levels, but larger changes in lipid oxidative damage. Further analyses show that higher ROS levels correlates with hyperproliferation of T cells in females, consistent with the known role of elevated ROS levels in the initiation of proliferation. This hyperproliferation of T cells can be attenuated by metformin, suggesting this FDA-approved drug as a possible treatment, as also suggested by a recent clinical study of LC patients. Thus, we report that both ME/CFS and LC are mechanistically related and could be diagnosed with quantitative blood cell measurements. We also suggest that effective, patient tailored drugs might be discovered using standard lymphocyte stimulation assays. ### Competing Interest Statement VS, SS, MMD, PM, HB, and MS are inventors on a patent related to oxidative stress signatures in ME/CFS and LC. SS co-founded and is a scientist at Material Alchemy (MA), an independent entity for Designing Materials for Sustainability. Turium was developed by MA for analyzing complex systems chemistry and is available to academia for research with licensing.
SARS-CoV-2 mitochondrial metabolic and epigenomic reprogramming in COVID-19 - PubMed
To determine the effects of SARS-CoV-2 infection on cellular metabolism, we conducted an exhaustive survey of the cellular metabolic pathways modulated by SARS-CoV-2 infection and confirmed their importance for SARS-CoV-2 propagation by cataloging the effects of specific pathway inhibitors. This rev …

Improve Glucose Metabolism and Glycogen stores

Fix the cell first: the correct order of operations for ME/CFS and Long Covid recovery A sequenced pathway showing the correct order of interventions. Start by fixing glucose metabolism and mitochondria with fasting and T3. Then improve lactate clearance and oxygenation. Then pace with a growing energy envelope. Only then does exercise become safe and productive. THE CORRECT ORDER Fix the cell first. Exercise is the reward, not the medicine. STEP 1 Fix glucose metabolism Dry fast to force autophagy + repair T3 to open PDH gate Low-carb then HCLF STEP 2 Clear lactate, fix oxygenation Buteyko / diaphragmatic breathwork daily Fasting clears lactate faster Reduce oxidative stress STEP 3 Pace and expand slowly Track steps, journal Walk first, weights later 10% increase per week Rest days are mandatory RESULT Exercise is safe Aerobic floor raised No PEM crash Fitness actually builds The wrong order (what most people do) Skip to exercise first, cell is still broken, anaerobic threshold is already at the floor. Every workout drains IgG, reactivates latent viruses, deepens the mitochondrial hole. PEM follows every time. Exercise (broken cell) Push through fatigue Crash, recover, repeat Why this order works Dry fasting forces the body to burn through metabolic debris and repair mitochondria from the inside. T3 + B1 reopen the PDH gate so glucose produces clean ATP again, raising the aerobic floor. Only then does exercise stop being a liability and start being a tool.

While working on glucose metabolism, you inadvertently attack insulin resistance and should improve your A1C levels (red blood cell glycation). Depending on your damage and current health situation, the first plan of attack might be to go on a very aggressive low-carb high-fat diet before attempting to improve glucose metabolism. A lot of the problems with neuro issues also revolves around brain hypometabolism. If you can't burn glucose in your brain you're going to have a problem. The temporary fast solution? Ketones. The real solution? Fixing glucose metabolism.

Time-dependent recovery of brain hypometabolism in neuro-COVID-19 patients - PubMed
Synergistic effects of systemic virus-mediated inflammation and transient hypoxia yield a dysfunction of the fronto-insular cortex, a signature of CNS involvement in neuro-COVID-19. This brain dysfunction is likely to be transient and almost reversible. The long-lasting brain hypermetabolism seems t …
  • Glycogen stores need to be expanded by having glucose in the system.
  • Improving glucose metabolism means improving mitochondria and reversing epigenomic reprogramming caused by the virus.
  • HCLF (high-carb, low-fat) = larger glycogen store capacity, similar to bile pool size when high fat. Beware of jumping too quickly into this diet. The human body is not meant to yo-yo so aggressively. Be real.
  • Improves aerobic capacity, which increases the amount of exercise you can do before anaerobic lactate production is activated.

Effective Pacing to Limit Stress on the Nervous System

The energy envelope: pacing within your limit to avoid PEM A diagram showing a safe energy envelope. Stay below your anaerobic threshold and energy slowly builds over weeks. Push above it and PEM wipes out the gains. Shows the week-over-week incremental pacing strategy: walking first, then adding light weights, then extending both gradually. ENERGY ENVELOPE Stay inside the envelope. Expand it slowly. Never bust through. Daily energy output Week 1 Week 2 Week 3 Week 4 Week 5 Week 6 AT ceiling Paced progress Push too hard PEM crash, back to zero Safe envelope (expand ~10% per week) Paced effort (inside envelope) Over-exertion + PEM crash Anaerobic threshold ceiling The pacing ramp Step 1 Walking only, track steps Step 2 Cut walk%, add light weights Step 3 Increase walk + keep weights Step 4 Rest days if needed, repeat Always Journal + step counter

Effective pacing is a critical strategy for managing energy expenditure in ME/CFS, preventing the overexertion that leads to post-exertional malaise (PEM). This involves a careful balance of activity and rest, tailored to the individual's energy limits. Using activity logs and step counters can help monitor and regulate physical exertion, ensuring it stays within a "safe" range. Incorporating frequent rest periods and focusing on essential activities while delegating or postponing non-essential tasks are key components of effective pacing.

  • Start with walking - increase weekly
  • Cut back a % of walking and replace it with a few light-weight exercises
  • Eventually, start increasing walking while still doing the light exercises
  • Keep this going, while also strategically resting and taking days off if necessary

Supporting the Nervous System – “Like a Baby Being Re-knit”

Once your nervous system is dysfunctional, it's like having your puppet strings cut. You have to try to reknit them, but this requires herculean effort. Activating the parasympathetic nervous system (PNS) is critical for promoting relaxation and reducing the stress that exacerbates ME/CFS symptoms. (there's also different variations to the PNS, some of which may be detrimental – Remember, a good nervous system can activate PNS and SNS at the right times). Techniques such as mindfulness meditation and yoga not only lower stress levels but also enhance PNS activity, fostering a state of calm that supports better oxygen delivery to tissues.

  • I don't believe you can do this without magic mushrooms + lion's mane combo. The neuronal regrowth is essential and I attribute nearly all of the final (last 10%) steps to this strategy. You'll start to understand why meditation heals the nervous system when you start to feel all your nerves healing.
  • I don't think you should bring mushrooms into the equation until you can turn back some of the exacerbated damage that has already been caused by the chronic illness. (You need to dry fast first). This recommendation is similar to bringing in nicotine. It is not smart to bring in these strategies while your body is still severely damaged. Even when you do bring it in, it has to start in minuscule doses. Low-carb diet and dry fasting first!
  • Lots of room for CBD, CBG, and THC when it comes to sleep, PNS, and relaxation hacks.

💡Dry fasting is a requirement to truly healing severe chronic illness, but it's not all there is to it. It's one of the best starting points. There's some great people in the chronic illness space like Cort from Health Rising. But none of them have gotten their health back, and most of them deteriorate over time. This is the difference between us. I put my body on the line and have had real success. Every post I write contains breadcrumbs to your full health - everyone is at a different stage and needs to tailor it to their situation. If these posts are beneficial for you, subscribe for the 5$/month. Being healed makes me less interested in doing research/experimentation and writing about it. (I just want to enjoy my life and family!!) But the paid subscriptions still light a fire under my ass, for which I am grateful! Thank you and good luck on your dry fasting journey.